AkaneRE (Akane v0.2)

PPI and Molecular Events, Relation Extraction (RE)

Made by Rune Sætre and Makoto Miwa

Link to AkanePPI v0.1.1 (Protein-Protein Interaction only).

Used for

BioNLP'09 Shared Task on Event Extraction (Paper)
BioCreative II.5 PPI extraction shared task (Paper)
REMerge, five PPI corpora, with 10-fold cross-validation (Paper)

Documentation

README, Short Manual
FAQ, Frequently Asked Questions
AkanePPI Publications
AkaneRE Publications
Sample Configuration File, with explanations

Download

The new AkaneRE system is available for download here...
If you have any questions/comments, please send an e-mail to satre at idi.ntnu.no

External Components

Component	Description	Download
Stand-Off-Manager (SOM)	README	StandOffManager.tgz
LIBLINEAR-1.5	Web	liblinear.tar.gz

if you have any questions, try the FAQ. If your question is not there, you can add it.
In case you have any problems, please send an e-mail to

Rune.Saetre at is.s.u-tokyo.ac.jp