Session 1
10:00-10:25 Alfonso Valencia: "A Bio Informatics Approach to the Extraction of Information in Molecular Biology" slids (526K)
10:25-10:50 Robert P. Futrelle
10:50-11:15 Peter Tonellato: "NLP and Disease Oriented Data Mining and Knowledge Retrieval" slids (165K)
11:15-11:40 Kosaku Ohkubo
11:40-12:00 Discussion
12:00-13:00 Lunch
Session 2
13:00-13:25 Lynette Hirschman: "Accessing the Biological Literature: Chalenges for Natural Language Processing" slids (88K)
13:25-13:50 Udo Hahn: "Biomedical Ontology Engineering as Thesaurus Re-engineering" slids (1,104K)
13:50-14:15 Jun'ichi Tsujii: "Resource Building for NLP in Biology" slids (169K)
14:15-14:40 Takako Takai: "Building Ontology and a Database for Cell Signaling System" slids (75K)
14:40-15:00 Discussion
15:00-15:15 Coffie break
Session 3
15:15-15:40 Goran Nenadic: "Automatic Term Management in Biology" slids (272K)
15:40-16:05 Dietrich Schuhmann: "Generation of a Knowledge Base for Nuclear Receptors and Cofactors" slids (108K)
16:05-16:30 W. John Wilbur: "Thematic Analysis of the AIDS Literature" slids (113K)
16:30-17:00 Discussion
18:00-20:00 Banquet
Session 4
10:00-10:25 Jerry Hobbs: "Abduction in Discourse Interpretation and Question-Answering" slids (40K)
10:25-10:50 Jong C. Park: "Combinatory Categorial Grammar: from Natural Language Understanding to Biomedical Applications" slids (57K)
10:50-11:15 Hinrich Schuetze: "Integrating Textual and Non-Textual Information" slids (70K)
11:15-11:40 Thomas S. Morton: "New Models for Information Retrieval" slids (37K)
11:40-12:00 Discussion
12:00-13:00 Lunch
Session 5
13:00-13:25 Vasileios Hatzivassiloglou: "Learning Relationships for the Automated Analysis of Regulatory Pathways" slids (603K)
13:25-13:50 Shinichi Morishita: "Optimization of Nearest Neighborhood Parameters for KDD-2001 Cup "The Genomics Challenge"" Document (10K)
13:50-14:15 Yuji Matsumoto: "Classification of Medical Terms based on Machine Learning" slids (511K)
14:15-14:40 Susumu Goto
14:40-15:00 Discussion
15:00-15:15 Coffie break
Session 6
15:15-15:40 Kevin Cohen: "Knowledge and Natural Language Processing in Molecular Biology" slids (133K)
15:40-16:05 Mark Craven: "Applying Statistical Methods for Relation and Keyphrase Extraction" slids (71K)
16:05-16:30 See-Kiong Ng: "PATHWEAVER: System, Studies, Results, Colaboration" slids (1,202K)
16:30-16:55 Jun'ichi Kazama: "Named Entity Recognition in the Molecular-Biology Domain" slids (399K)
16:55-17:15 Discussion
17:15-18:30 Dinner on your own
18:30-20:30 Birds-of-a-feather meeting
Session 7
10:00-10:25 Masatoshi Yoshikawa: "Design and Implementation of a Graphical Browser for Gene Ontology"
10:25-10:50 Hiroshi Nakagawa: "Extracting Domain Terms from Corpora" slids (68K)
10:55-11:20 Hidemasa Bono: "Functional Annotation of Mouse cDNA clones in XML" slids (2,577K)
11:20-12:00 Discussion
12:00-13:00 Lunch
13:00-17:00 Public Lectures
The pages were last updated on the 25th July 2002 by Tomoko OHTA.
Department of Information Science, Faculty of Science,
University of Tokyo,
Hongo 7-3-1, Bunkyo-ku, Tokyo 113, Japan.